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Departments of 1 Veterinary Physiology and Pharmacology and 2 Biochemistry and Biophysics,, Texas A & M University, College Station, Texas 77843-4466, USA 3 The Institute of Biosciences and Technology,, Texas A & M University Health Science Center, 2121 West Holcombe Boulevard, Houston, Texas 77030, USA
(Correspondence should be addressed to S Safe; Email: ssafe{at}cvm.tamu.edu)
The authors have nothing to disclose.
| Abstract |
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(RAR
) genes, RNA interference using small inhibitory RNAs for Sp1 (iSp1), Sp3 (iSp3), and Sp4 (iSp4) decreased both basal and E2-induced transactivation. The contributions of individual Sp proteins to basal and E2-induced activity were promoter dependent. iSp1, iSp3, and iSp4 also significantly inhibited hormonal induction of E2F1, CAD, and RAR
mRNA levels; however, the enhanced inhibitory effects of the latter two small inhibitory RNAs suggest that Sp3 and Sp4 play a major role in estrogen receptor
/Sp-mediated gene expression in MCF-7 cells.
| Introduction |
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and ERß) and multiple splice variants have been identified and these various forms exhibit both overlapping and different activities (Hall et al. 2001, Olefsky 2001, Nilsson & Gustafsson 2002, Matthews & Gustafsson 2003). ER
and ERß exhibit the typical domain structures of nuclear receptors, and similarities in their DNA binding (C) and ligand binding (EF) domains are correlated with comparable mechanisms of DNA binding and similar but not identical interactions with various estrogenic ligands (Hall et al. 2001, Olefsky 2001, Nilsson & Gustafsson 2002, Matthews & Gustafsson 2003). The N-terminal regions (AB) of human ER
and ERß exhibit only 17% amino acid homology and this variability may account for some of the differences between the ER subtypes such as those observed in the murine uterus where ERß tends to inhibit ER
-dependent uterotrophic responses (Krege et al. 1998, Weihua et al. 2000).
The classical ER mechanism of action involves ligand-induced formation of an ER homodimer which interacts with estrogen responsive elements (EREs; Klein-Hitpass et al. 1986, Cowley et al. 1997, Hyder et al. 1999) in target gene promoters and recruits cofactors necessary for transactivation. There is an increasing evidence that the classical genomic ER–ERE complex formation is only one of several genomic and non-genomic pathways of estrogen action (Blobel & Orkin 1996, Delfino & Walker 1999, Kelly & Wagner 1999, Kushner et al. 2000, Watson et al. 2002, Razandi et al. 2004, Safe & Kim 2004, Levin 2005). Genomic ER associates with other transcription factors such as the activating protein-1 (AP-1) complex, nuclear factor kappa B (NF
B), and specificity proteins (Sps) to modulate ligand-dependent gene expression. For example, studies in this laboratory and others have demonstrated that deletion and mutational analysis of promoters derived from several E2-responsive genes contain GC-rich motifs that bind Sp proteins (Safe & Kim 2004). Some of the genes that fall into this category are important for cell proliferation, angiogenesis, and nucleotide metabolism and include E2F1, retinoic acid receptor
(RAR
), carbamoylphosphate synthetase/aspartate transcarbamylase/dihydroorotase (CAD), bcl-2, DNA polymerase
, vascular endothelial growth factor (VEGF), VEGFR receptor 2 (VEGFR2), progesterone receptor, creatine kinase B, thymidylate synthase, insulin-like growth factor binding protein 4, epidermal growth factor receptor, receptor for advanced glycation end products, low density lipoprotein receptor, vitamin D receptor, pS2, LRP16, metastasis associated protein 3, and SK3 (Porter et al. 1996, 1997, Duan et al. 1998, Sun et al. 1998, 2005, Dong et al. 1999, Qin et al. 1999, Wang et al. 1999, 2002, Xie et al. 1999, 2000, Byrne et al. 2000, Salvatori et al. 2000, Saville et al. 2000, Stoner et al. 2000, 2004, Tanaka et al. 2000, Castro-Rivera et al. 2001, Li et al. 2001, Samudio et al. 2001, Bruning et al. 2003, Jacobson et al. 2003, Khan et al. 2003, Ngwenya & Safe 2003, Schultz et al. 2003, 2005, Fujita et al. 2004, Bardin et al. 2005, Zhao et al. 2005, Higgins et al. 2006b). In addition, RNA interference studies with a small inhibitory RNA (siRNA) for Sp1 (iSp1) show that after transfection with iSp1, there was a significant decrease in hormone-induced G0/G1 to S-phase progression, suggesting that ER
/Sp1 plays an important role in this process (Abdelrahim et al. 2002).
MCF-7 cells express multiple Sp proteins including Sp1, Sp3, and Sp4, and the role of these individual proteins in mediating E2-induced transactivation has not been determined. Using the E2F1 gene as a model, we now show that hormonal activation of a GC-rich E2F1 promoter construct is inhibited in cells cotransfected siRNAs for Sp1, Sp3 (iSp3), and Sp4 (iSp4), and using this approach, it was shown that these Sp proteins are also important for hormone-induced expression of E2F1 mRNA and protein. Similar results were observed for two other E2-responsive genes, CAD and RAR
, demonstrating that all three Sp proteins and particularly Sp3 and Sp4 are important for ER
/Sp-mediated gene expression in MCF-7 cells.
| Materials and methods |
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MCF-7 cells were purchased from the American Type Culture Collection (ATCC, Manassas, VA, USA) and were cultured in DME/F12 (Sigma Chemical Co.) media supplemented with 5% fetal bovine serum (FBS; JRH Biosciences, Lenaxa, KS, USA; or Atlanta Biologicals Inc., Norcross, GA, USA), 1.5 g/l sodium bicarbonate, and 10 ml/l antibiotic–antimycotic solution (Sigma). Cells were maintained in incubators at 37 °C under humidified 5% CO2: 95% air. Dimethyl sulfoxide (Me2SO), PBS, and E2 were purchased from Sigma. Reporter lysis buffer and luciferase assay reagent were purchased from Promega Corp. and/or Boehringer Mannheim. ß-Galactosidase activity was measured using Tropix Galacto-Light Plus assay system (Tropix, Bedford, MA, USA). Instant Imager and Lumicount micro-well plate reader were purchased from Packard Instrument Co. (Downers Grove, IL, USA). ß-Actin antibody was obtained from Sigma and all other antibodies were purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA). Human ER
expression plasmid was originally provided by Dr Ming-Jer Tsai (Baylor College of Medicine, Houston, TX, USA) and was recloned into pcDNA3 in this laboratory. Promoter luciferase construct pRAR
2 (–79/–49) was made by inserting the oligonucleotide spanning –79 to –49 of the human RAR
1 promoter into the pGL2 basic luciferase reporter plasmid (Promega Corp). CAD promoter luciferase construct pCAD2 (–90/+25) was kindly provided by Dr Peggy Farnham (University of Wisconsin, Madison, WI, USA). E2F1 promoter luciferase construct pE2F1h was made in this laboratory as described (Wang et al. 1999). Plasmid pSp13 containing three consensus Sp1 binding sites linked to a luciferase reporter gene was cloned into pXP2 plasmid in this laboratory.
Transient transfection assays of small inhibitory RNA
Validated, non-targeting small inhibitory RNA (siRNA; Silencer Negative Control siRNA; iNS1) was purchased from Ambion (Austin, TX, USA) and siRNAs for Sp1, Sp3, and Sp4 were purchased from Dharmacon Research (Lafayette, CO, USA). MCF-7 cells were seeded in DME/F12 medium supplemented with 2.5% charcoal-stripped serum overnight in 12-well plates. After 16–20 h, siRNA duplexes were transfected using Lipofectamine 2000 Reagent (Invitrogen Life Technologies). After 24 h, reporter plasmids (200 ng) were cotransfected with ER
expression plasmid (150 ng) and 50 ng pCDNA3.1–His-LacZ using GeneJuice (Novagen, EMD Biosciences Inc., Madison, WI, USA) according to the manufacturer's protocol. Cells were then treated for 36 h with Me2SO or E2 and harvested in 100 µl of cell lysis buffer (Promega Corp). Luciferase activities in the various treatment groups were performed on 20 µl of cell extract using the luciferase assay system (Promega Corp.) in a luminometer (Packard Instrument Co., Meriden, CT, USA) and results were normalized to ß-galactosidase enzyme activity, which was carried out on 20 µl of cell extract. Sequences of siRNA oligonucleotides for Sp1, Sp3, and Sp4 are summarized below.
Preparation of whole cell extracts and western blot analysis
MCF-7 cells were seeded into six-well plates in DME/F12 medium supplemented with 2.5% charcoal-stripped serum. The next day, cells were transfected with siRNAs using Lipofectamine 2000 reagent according to the manufacturer's protocol. After 55–60 h, cells were dosed with Me2SO and E2 for 18 h and then harvested with ice-cold lysis buffer (50 mM HEPES (pH 7.5), 500 mM NaCl, 10% (v/v) glycerol, 1% Triton X-100, 1.5 mM MgCl2, and 1 mM EGTA) and supplemented with protease inhibitor cocktail (Sigma). Equal amounts of protein from each treatment group were boiled in 1x sample buffer (50 mM Tris–HCl, 2% SDS, 0.1% bromphenol blue, and 175 mM ß-mercaptoethenol) for 5 min and separated on 7.5 or 10% gel, and then transferred to polyvinylidene difluoride membrane (Bio-Rad) overnight at 30 V. Membranes were blocked in Blotto (5% milk, Tris-buffered saline (10 mM Tris–HCl (pH 8.0) and 150 mM NaCl), and 0.05% Tween 20) for 30 min and probed with primary antibodies for 2–4 h. Membranes were washed for 30 min in 1x TBS-Tween, probed with peroxidase-conjugated secondary antibody for 1–2 h, and then washed in 1x TBS-Tween for 30 min. Ten millilitres of HRP substrate (Dupont-NEN, Boston, MA, USA) were added and incubated for 1 min and visualized by autoradiography. Protein band intensities were scanned on a JX-330 scanner (SHARP Corp., Mahwah, NJ, USA) using Adobe Photoshop 3.0 (Adobe Systems Inc., San Jose, CA, USA).
Immunohistochemistry
For ER
-Sp1 colocalization experiments, MCF-7 cells were seeded onto two-well glass chamber slides (Nalge Nunc International, Naperville, IL, USA) at 100 000 cells per well in Dulbecco's modified Eagle's medium (DMEM)/F12 medium supplemented with 5% charcoal stripped FBS, incubated in a 37 °C incubator with 5% CO2 for 24 h, and treated with Me2SO vehicle or 10 nM E2 for 1 h. Slides were then washed with PBS, fixed with –20 °C methanol, air dried, and washed with PBS +0.3% Tween 20 (PBS/Tween). Slides were blocked for 1 h with 5% donkey serum in antibody dilution buffer (1% BSA in PBS/Tween), washed with PBS/Tween briefly, incubated with anti-Sp1 PEP-2 (goat) antibody (Santa Cruz) at 1:100 dilution (goat serum for controls) in antibody dilution buffer at 4 °C for 12 h. Slides were washed with PBS/Tween (3x10 min), incubated with donkey anti-goat immunoglobulin G (IgG) fluorescein isothiocyanate (FITC) (Santa Cruz) at 1:200 dilution in antibody dilution buffer for 1 h and washed with PBS/Tween (3x10 min). Slides were subsequently blocked with 5% donkey serum in antibody dilution buffer for 1 h, washed with PBS/Tween briefly, incubated with anti-ER
H-184 antibody (Santa Cruz) at 1:100 dilution in antibody dilution buffer at 4 °C for 12 h (rabbit serum for controls), washed with PBS/Tween (3x10 min), incubated with donkey anti-rabbit IgG Alexa Fluor 594 (Molecular Probes, Eugene, OR, USA) at 1:500 dilution in antibody dilution buffer for 1 h, and washed with PBS/Tween (3x10 min). Slides were finally washed in deionized water, and cover glass mounted using Prolong Gold antifade reagent with DAPI (Molecular Probes). Immunofluorescence images of Sp1 and ER
were examined using a Zeiss Axioplan2 microscope (Carl Zeiss, Thornwood, NY, USA) fitted with an Axiocam high-resolution digital camera. Digital images were captured using Axiovision 4.1 software (Carl Zeiss).
For ER
-Sp4 colocalization experiments, COS-7 cells were seeded as described above, transfected with 250 ng of ER
and 250 ng of Sp4 expression plasmid using GeneJuice transfection reagent (Novagen), incubated at 37 °C with 5% CO2 for 24 h, and then treated with Me2SO vehicle or 10 nM E2 for 1 h, and immunostaining experiments were carried out as described above using ER
D-12 (Santa Cruz) paired with donkey anti-mouse Alexa Fluor 488 (Molecular Probes) and Sp4 V-20 (Santa Cruz) paired with donkey anti-rabbit IgG Alexa Fluor 594 (Molecular Probes) antibodies.
Real-time PCR
Cells were seeded into six-well plates in DME/F12 medium supplemented with 2.5% charcoal-stripped serum overnight. The next day cells were transfected with siRNAs using Lipofectamine 2000 Reagent and, after 55–60 h, cells were treated with Me2SO or E2 for 6 or 12 h. RNA was extracted using Qiagen RNeasy minikit (Qiagen) following the manufacturer's protocol and was reverse transcribed for cDNA synthesis using Superscript II reverse transcriptase (Invitrogen) according to the manufacturer's protocol. The cDNA reaction mixture was then used to carry out PCR using SYBR Green PCR Master Mix from PE Applied Biosystems (Warrington, UK) on an ABI Prism 7700 Sequence Detection System (PE Applied Biosystems). The relative quantitation of samples was carried out using comparative CT method and TATA binding protein (TBP) was used for normalization. Quantitect primer assays (Qiagen) for Sp1, Sp3, Sp4, E2F1, and CAD were used to perform PCR, whereas primers for RAR
and TBP were purchased from Integrated DNA technologies (Coralville, IA, USA) and are as follows:
Chromatin immunoprecipitation (ChIP) assay
MCF-7 cells (1x107) were treated with Me2SO (time 0) or E2 (10 nM) for different times. Cells were then fixed with 1.5% formaldehyde, and the cross-linking reaction was stopped by addition of 0.125 M glycine. Cells were scraped, pelleted, and hypotonically lysed, and nuclei were collected. Nuclei were then sonicated to the desired chromatin length (
500 bp). The chromatin was precleared by addition of protein A/G-conjugated beads (Pierce, Rockford, IL, USA). The precleared chromatin supernatants were immunoprecipitated with antibodies specific to IgG, ER
, Sp1, Sp3, and Sp4 (Santa Cruz Biotechnology) at 4 °C overnight. The protein–antibody complexes were collected by addition of protein A/G-conjugated beads for 1 h, and the beads were extensively washed. The protein–DNA crosslinks were eluted and reversed. DNA was purified by Qiaquick Spin Columns (Qiagen) followed by PCR amplification. The pS2 primers are: 5'-CTA GAC GGA ATG GGC TTC AT-3' (forward) and 5'-ATG GGA GTC TCC TCC AAC CT-3' (reverse), which amplify a 209-bp region of the human pS2 promoter containing an estrogen response element (ERE). The CAD primers are: 5'-CTT GGG GTG GGA GGG ACT-3' (forward) and 5'-GCG GCA GCA GCA GAG ACT-3' (reverse), which amplify a 158-bp GC-rich region of the human CAD promoter. The RAR
primers are: 5'-GCC CTT CCC GAG GTC TAT TA-3' (forward) and 5'-GAG GGT ACG GAG CAG AGG TA-3' (reverse), which amplify a 138-bp GC-rich region of the human RAR
promoter. The E2F1 primers are: 5'-CTG gta cca tcc gga caa ag-3' (forward) and 5'-TTT TTG CCG CGA AAG AGC-3' (reverse), which amplify a 198-bp region of the human E2F1 promoter containing GC-rich Sp-binding sites. PCR products were resolved on a 2% agarose gel in the presence of 1:10 000 SYBR gold (Molecular Probes).
Statistical analysis
Experiments were repeated two or more times, and data are expressed as mean±S.E.M. for at least three replicates for each treatment group. Statistical differences between treatment groups were determined using Super ANOVA and Scheffé's test. Treatments were considered significantly different from controls if P<0.05.
| Results |
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Analysis of several gene promoters from E2-responsive genes have identified GC-rich motifs that are required for hormone-induced transactivation in breast cancer and other cell lines (Porter et al. 1996, 1997, Duan et al. 1998, Sun et al. 1998, 2005, Dong et al. 1999, Qin et al. 1999, Wang et al. 1999, 2002, Xie et al. 1999, 2000, Byrne et al. 2000, Salvatori et al. 2000, Saville et al. 2000, Stoner et al. 2000, 2004, Tanaka et al. 2000, Castro-Rivera et al. 2001, Li et al. 2001, Samudio et al. 2001, Bruning et al. 2003, Jacobson et al. 2003, Khan et al. 2003, Ngwenya & Safe 2003, Schultz et al. 2003, 2005, Fujita et al. 2004, Bardin et al. 2005, Zhao et al. 2005, Higgins et al. 2006b). In this study, we have also used RNA interference and small inhibitory RNAs (siRNAs) for Sp1 (iSp1), Sp3 (iSp3), and Sp4 (iSp4) to investigate the role of individual Sp proteins in ER
/Sp-mediated transactivation in MCF-7 cells. Previous studies in cancer cell lines have demonstrated the specificity and effectiveness of iSp1, iSp3, and iSp4 in Sp protein knockdown (Abdelrahim et al. 2002, 2004, Higgins et al. 2006a,b), and results in Fig. 1A–C illustrate that transfected iSp1, iSp3, and iSp4 significantly decreased Sp1, Sp3, and Sp4 mRNA levels in whole cell extracts from MCF-7 cells. In parallel studies, transfected iSp1, iSp3, and iSp4 also decreased Sp1, Sp3, and Sp4 protein expression (Fig. 1D–F) in MCF-7 cells.
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/Sp-mediated transactivation (Saville et al. 2000, Kim et al. 2003, 2005). This construct contains three tandem consensus GC-rich binding sites linked to a minimal TATA-luciferase and is E2 responsive only after cotransfection with ER
and this is due, in part, to overexpression of pSp13 in transfected cells and limiting levels of ER
. This system has been ideal for studying hormone activation of pSp13 in ER-positive or ER-negative cell lines thereby determining the contributions of cell context on the induction response (Saville et al. 2000, Kim et al. 2003, 2005). Results illustrated in Fig. 2A show that E2 induces transactivation in MCF-7 cells transfected with pSp13 and non-specific RNA (iNS1) and similar results were obtained in the presence or absence of transfected iNS1 oligonucleotide (data not shown). The results show that all three siRNAs or their combinations significantly decreased basal luciferase activity, and iSp1 and iSp4 were more effective than iSp3. The fold induction of luciferase by E2 compared with solvent (Me2SO) control shows that the effectiveness of the siRNAs for decreasing fold induction was iSp1>iSp4>iSp3 (Fig. 2B) with only minimal changes in fold induction observed for iSp4 and iSp3. The apparent lack of effectiveness of iSp4 and iSp3 for inhibiting fold induction of luciferase activity when compared with iSp1 was due, in part, to their differential inhibitory effects on basal luciferase activity. In cells transfected with iSps in combination, the maximal inhibition of fold induction was observed in cells transfected with iSp1/iSp3 and iSp1/iSp4, whereas minimal changes were observed in cells transfected with iSp3/iSp4. However, these data suggest that for the pSp13 construct containing three consensus GC-rich sites, Sp1 plays the most important role in E2-dependent activation of ER
/Sp.
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/Sp-mediated activation of E2F1E2 induces E2F1 gene expression in MCF-7 cells (Wang et al. 1999, Ngwenya & Safe 2003), and promoter analysis has identified critical GC-rich sites at between –169 and –111 in the proximal region of the E2F1 promoter. Figure 3A illustrates luciferase activity in MCF-7 cells transfected with pE2F1 (–169/–54) and various iSps or their combinations. The results show that individual siRNAs for Sp1, Sp3, and Sp4 decreased luciferase by 70–90% with iSp3 as the most effective siRNA. These results indicate that Sp proteins play the major role in regulating basal luciferase activity in MCF-7 cells transfected with pE2F1 (–169/–54). Moreover, the effectiveness of iSp1, iSp3, and iSp4 in decreasing activity suggests that the loss of any single Sp protein was important for transcription, indicating cooperative interactions among these transcription factors for regulating luciferase activity. The effects of individual and combined Sp protein knockdown in MCF-7 cells transfected with pE2F1 (–169/–54) and treated with Me2SO or E2 were also determined, and the effects on fold induction by E2 are illustrated in Fig. 3B. With the exception of the results observed for iSp3, the fold induction by E2 was decreased 50–65% by iSp1, iSp4, and their combinations (including iSp3+iSp1 and iSp3+iSp4). iSp3 only slightly decreased the fold induction by E2 and was less effective than either iSp1 or iSp4. These results were similar to those observed for the effects of iSps on hormone inducibility in MCF-7 cells transfected with pSp13 (Fig. 2A).
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/Sp-dependent activation of E2F1. iSp3 was more effective in decreasing induction of E2F1 mRNA by E2 (Fig. 3C) than decreasing induction of luciferase activity by E2 in cells transfected with pE2F1h (Fig. 3B). This suggests that other regulatory regions of E2F1 that are affected by Sp3 are important for induction of E2F1 mRNA levels by E2. We also observed in a separate experiment that induction of E2F1 protein by E2 and basal E2F1 protein expression were also decreased in MCF-7 cells transfected with iSp1, iSp3, and iSp4 (Fig. 3D). These results demonstrate the hormone inducibility of E2F1 is dependent on Sp transcription factors. Thus, although Sp3 plays a minimal role in hormone-induced activation of pE2F1 (–169/–54), this transcription factor is important for mediating hormone-dependent induction of E2F1 mRNA and protein.
ER
/Sp-mediated activation of CAD and RAR
The –90 to +25 region of the CAD gene promoter is also E2 responsive in transfection assays, and deletion and mutation analyses have identified three proximal GC-rich sites which are required for hormone responsiveness (Khan et al. 2003). Results in Fig. 4A show that in MCF-7 cells transfected with pCAD (–90/+25), cotransfection with iSp1, iSp3, iSp4, or their combinations significantly decreased activity (>50%); however, the magnitude of the decreased activity was significantly less than observed for pE2F1 (–169/–54; Fig. 3A). Since the magnitude of the decreased response was similar after transfection with iSp1, iSp3, or iSp4, it is likely that all three transcription factors are required for basal activity. In MCF-7 cells transfected with pCAD (–90/+25) plus iNS1 and treated with Me2SO or E2, cotransfection with iSp1, iSp3, iSp4, or their combinations significantly decreased hormone-induced transactivation (Fig. 4B). Fold induction was decreased only slightly more effectively in cells transfected with iSp1 and iSp4 when compared with iSp3; however, all three Sp transcription factors were important for hormone responsiveness and combinations of iSps inhibited hormone inducibility more than individual siRNAs. Similar results were observed for induction of CAD mRNA levels by E2 (Fig. 4C) where the induction response was significantly decreased in MCF-7 cells transfected with iSp1, iSp3, and iSp4. In contrast, iSps had only a minimal effect of CAD mRNA levels (data not shown).
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since previous studies have identified proximal GC-rich motifs at –68 to –62 and –59 to –52 required for hormonal activation of promoter constructs (Sun et al. 1998). In contrast to the pCAD (–90/+25) and pE2F1 (–169/–54) constructs, basal luciferase activity was not decreased in MCF-7 cells transfected with pRAR
(–79/–49) and iSp1 or iSp4 but was significantly decreased only after cotransfection with iSp3 (Fig. 5A). Cotransfection with iSp combinations (except iSp1+iSp3) decreased activity; however, it was evident that despite the presence of GC-rich motifs in pRAR
(–79/–49), Sp proteins were not the predominant transcription factors required for basal activity. In contrast, fold inducibility of luciferase activity in MCF-7 cells treated with Me2SO or 10 nM E2 and transfected with pRAR
(–79/–49) was primarily decreased in cells transfected with iSp1 and iSp4 but not iSp3 (Fig. 5B). Since both iSp1 and iSp4 significantly decreased hormone responsiveness, any combination of these siRNAs inhibited E2-induced transactivation. Thus, hormone-dependent activation of pRAR
(–79/–49) was primarily dependent on ER
/Sp1 and ER
/Sp4, and this was similar to results obtained with pSp13 (Fig. 2B) and pE2F1 (–169/–54; Fig. 3B). Basal expression of RAR
mRNA was only minimally affected by iSps (data not shown); however, induction of RAR
mRNA levels by E2 was decreased after cotransfection with iSp1, iSp3, and iSp4 with iSp3 being the most effective siRNA (Fig. 5C). iSp3 completely abrogated induction of RAR
by E2, whereas in transfection studies with pRAR
2, which contains a –79 to –49 RAR
promoter insert, iSp3 did not significantly decrease hormone responsiveness (Fig. 5B). These results suggest that GC-rich sites in addition to those at –79 to –49 may be important for ER
/Sp-mediated induction of RAR
mRNA by E2.
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with Sp1 and Sp4
Previous studies showed that ER
interacts with Sp1 and Sp3 (Porter et al. 1996, 1997, Saville et al. 2000, Stoner et al. 2000); however, the results of RNA interference assays now demonstrate that, in MCF-7 cells, Sp4 plays an important role in E2-dependent activation of ER
/Sp. Therefore, we have investigated colocalization of ER
and Sp1 in MCF-7 cells, which exhibit endogenous expression of both proteins (Fig. 6A). ER
and Sp1 proteins alone exhibit nuclear staining and the colocalized proteins exhibit a punctate staining pattern, and these results complement previous studies showing direct interactions of both proteins (Porter et al. 1997). Colocalization experiments with ER
and Sp4 were examined in COS-7 cells transfected with ER
and Sp4 expression plasmids (Fig. 6B). Immunostaining of endogenous Sp4 in MCF-7 cells was weak due to the relative insensitivity of the commercially available antibodies; however, in transfected COS-7 cells, Sp4 staining is observed and is more intense in the central part of the nucleus. ER
alone is uniformally observed in the nucleus and, after treatment with E2, a more punctate staining is observed and the colocalized ER
/Sp4 also exhibited punctate staining. Several attempts to investigate colocalization of ER
and Sp3 were unsuccessful, due to the failure of available Sp3 antibodies to detect Sp3 by this method. However, these results demonstrate that ER
colocalizes with Sp1 and Sp4 and these transcription factors play an important role in ER
/Sp-mediated expression of E2F1, CAD, and RAR
in MCF-7 cells. However, the effects of E2 on colocalization are minimal, suggesting interactions of ER
with Sp proteins in the presence or absence of hormone, and this is consistent with previous ChIP assays (Higgins et al. 2006a) and the reported coimmunoprecipitation of ER
and Sp1 (±hormone; Saville et al. 2000).
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and Sp proteins with the pS2, E2F1, CAD, and RAR
gene promoters
Previous studies show that the E2-responsive region of the pS2 gene promoter contains GC-rich motifs and ChIP analysis of the pS2 promoter (Fig. 7A) shows constitutive binding of Sp1, Sp3, and Sp4. The band intensities exhibit minimal changes after treatment with 10 nM E2 for up to 2 h. However, as previously reported (Shao et al. 2002, Metivier et al. 2003, Acevedo et al. 2004, Krieg et al. 2004, Sun et al. 2005), treatment of MCF-7 cells recruits ER
to the pS2 promoter, and this is consistent with interactions with the ERE motif at –405 to –393. Results in Fig. 7B–D summarize ChIP assays, which examine basal and hormone-induced interactions of ER
, Sp1, Sp3, and Sp4 with the GC-rich regions of the RAR
, E2F1, and CAD gene promoters respectively. Sp1, Sp3, and Sp4 are constitutively bound to all three promoters and treatment with E2 does not increase or decrease Sp interactions with these promoters. Moreover, similar results were also observed for ER
which was bound to the GC-rich RAR
, E2F1, and CAD gene promoters in the presence or absence of hormone treatment. Since Sp1, Sp3, and Sp4 are important for basal expression of the genes examined in this study, it is not surprising that these proteins are associated with these GC-rich promoters. These results are consistent with the known ligand-independent interactions of ER
with Sp proteins (Porter et al. 1997, Saville et al. 2000, Stoner et al. 2000), and the colocalization of ER
with Sp1 and Sp4 in Me2SO (and E2)-treated cells (Fig. 6). Moreover, we have recently reported similar ER
and Sp interactions with the VEGFR2 promoter in ZR-75 cells using a ChIP assay (Higgins et al. 2006b). Our results demonstrate for the first time that hormonal activation of genes containing E2-responsive GC-rich promoters in MCF-7 cells requires ER
interactions with Sp1, Sp3, and Sp4.
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| Discussion |
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ER/Sp1-dependent transactivation is also complex and dependent on multiple variables. For example, E2 activates ER
/Sp but not ERß/Sp in several different cell lines and in HeLa cells, E2 decreases ERß/Sp1-dependent transactivation and this may be a pathway for decreased gene expression by hormones (Saville et al. 2000). In addition, there is also evidence that activation of ER
/Sp1 involves multiple domains of ER
and domain requirements are also dependent on the structure of the ER agonist (Saville et al. 2000, Kim et al. 2003). Previous studies have identified multiple gene promoters activated by ER
/Sp and Sp1 knockdown by RNA interference inhibits hormone-induced G0/G1 to S-phase progression in MCF-7 cells (Abdelrahim et al. 2002). However, the role of individual Sp1, Sp3, and Sp4 proteins in mediating ER
/Sp-induced gene expression in MCF-7 cells has not been determined. In this study, we have used RNA interference to investigate the effects of Sp protein knockdown (individual and combined) on induction of E2F1, RAR
, and CAD gene expression by E2 since all three genes contain GC-rich promoters that are E2-responsive in transfection studies (Wang et al. 1999, Khan et al. 2003, Ngwenya & Safe 2003).
The siRNAs for Sp proteins are highly specific and have been used in several studies (Abdelrahim et al. 2002, 2004, Higgins et al. 2006a,b), and they efficiently decrease expression of both Sp1, Sp3, and Sp4 mRNA and protein (Fig. 1). The effects of iSps on basal luciferase activity in MCF-7 cells transfected with pSp13, pE2F1 (–169/–54), pCAD (–90/+25), and pRAR
(–79/–49) demonstrated that despite common GC-rich sites in all three promoters, decreased Sp protein expression differentially affected activity. Luciferase activity in cells transfected with pE2F1 (–169/–54) was decreased
70–90% after cotransfection with iSp1, iSp3, and iSp4, whereas in cells transfected with pRAR
(–79/–49), only iSp3 decreased activity and iSp1 actually increased activity. Although basal activity of the four promoters were differentially affected by Sp protein knockdown, E2-induced transactivation in cells transfected with these constructs, and fold induction was decreased in cells transfected with iSp1 or Sp4 (and their combinations), whereas iSp3 was the least effective or ineffective at decreasing fold induction. However, this may be, in part, due to the effects of iSp3 on decreasing basal activity in cells transfected with iSp13, pRAR
(–79/–49), and pE2F1 (–169/–54). All three iSps induced a comparable decrease in basal activity in MCF-7 cells transfected with pCAD (–90/+25) and iSp3 also decreased hormone-induced activity with this construct. Transfected iSps significantly decreased induction of E2F1, RAR
, and CAD mRNA levels by E2 in MCF-7 cells (Figs 3–5![]()
), and the order of effectiveness was iSp4
iSp3>iSp1. Knockdown of Sp3 resulted in a complete loss of hormone-induced RAR
mRNA, whereas in cells transfected with pRAR
(–79/–49), iSp3 did not affect E2-induced transactivation. This suggests that other GC-rich sites in the RAR
promoter are required for ER
/Sp-mediated expression of this gene. Previous studies demonstrate that both Sp1 and Sp3 interact with ER
(Porter et al. 1996, 1997, Saville et al. 2000, Stoner et al. 2000) and we now show that both Sp1 and Sp4 colocalize with ER
in MCF-7 cells (Fig. 6). Thus, at least for the RAR
, CAD, and E2F1 genes, all three Sp proteins play a role in ER
/Sp-induced transactivation and, for E2F1, we also showed decreased protein expression (Fig. 3).
The ChIP assay has been used extensively to investigate the ligand-induced assembly of ER
and other coactivators and nuclear cofactors on hormone-responsive gene promoters, and pS2 has been used extensively as a model for these studies (Shao et al. 2002, Metivier et al. 2003, Acevedo et al. 2004, Krieg et al. 2004, Sun et al. 2005). This gene has a well-characterized E2-responsive non-consensus ERE motif, and several studies have reported that treatment of MCF-7 cells with E2 recruits ER
to the pS2 promoter. Similar results were observed in this study (Fig. 7A). Moreover, Sp1, Sp3, and Sp4 were also bound to the pS2 promoter, and PCR bands associated with the Sp protein-promoter interactions were not appreciably changed after treatment with E2. Sun et al. (2005)) also reported interactions of Sp1 and Sp3 with the pS2 promoter. Band intensities associated with Sp3-promoter interactions were unchanged after treatment with E2, whereas Sp1-promoter interactions were decreased; however, these changes were not observed in this study. We further investigated Sp protein interactions with the E2-responsive GC-rich regions of the E2F1, CAD, and RAR
promoters in a ChIP assay and observed interactions of Sp1, Sp3, and Sp4 with these promoters in untreated MCF-7 cells (Fig. 7B and D). After treatment of MCF-7 cells with E2, Sp protein-promoter interactions did not appreciably change, and this was similar to that observed for interactions of Sp proteins with the pS2 promoter (Fig. 7A). Binding of Sp1, Sp3, and Sp4 to the CAD, E2F1, and RAR
promoters was similar in solvent and E2-treated cells, and this is consistent with the role of all three proteins in mediating basal expression and hormonal activation of ER
/Sp-dependent CAD, E2F1, and RAR
mRNAs (Figs 3C, 4C, and 5C).
ER
was also constitutively bound to the GC-rich promoters and, in contrast to observations with the pS2 promoter (Fig. 7A; Shao et al. 2002, Metivier et al. 2003, Acevedo et al. 2004, Krieg et al. 2004, Sun et al. 2005), E2 did not enhance ER
interactions with the CAD, E2F1, and RAR
promoters in MCF-7 cells. Similar results were reported for the VEGFR2 promoter in ZR-75 cells (Higgins et al. 2006a) suggesting that there are fundamental differences in hormone-dependent interactions of ER
with E2-responsive promoters containing GC-rich or ERE motifs. We have carried out ChIP assays on several GC-rich promoters under a variety of conditions but invariably find that ER
, Sp1, Sp3, and Sp4 are associated with these promoters in the presence or absence of E2. These results suggest that there may also be differences in the recruitment of other nuclear cofactors to these gene promoters, and promoter-dependent differences in coactivator recruitment are currently being investigated.
In summary, results of this study demonstrate that Sp1, Sp3, and Sp4 transcription factors are important for hormone-induced E2F1, CAD, and RAR
mRNA expression. This is the first report showing the different contributions of ER
/Sp1, ER
/Sp3, and ER
/Sp4 on hormone-induced transactivation in MCF-7 cells. The relative effects of these individual proteins on ER
/Sp-mediated transactivation were dependent on the specific gene and gene promoter. Basal activity of the GC-rich proximal promoter regions of the E2F1, CAD, and RAR
were differentially effected by Sp protein knockdown (Figs 3A, 4A, and 5A) and activity in cells transfected with pRAR
-2 was only minimal decreased by iSps. Despite these differences, results of ChIP assays show that Sp1, Sp3, Sp4, and ER
were associated with all three promoters in the absence or presence of E2 (Fig. 7). In ongoing studies, we are further analyzing interactions of ER
and Sp proteins with the E2F1, RAR
, CAD, and other gene promoters and comparing their binding to E2-responsive and non-responsive promoter sequences. We are also investigating the effects of ligand structure, coactivators, and cell context on this important genomic pathway of estrogen action using both cell culture and in vivo models.
| Acknowledgements |
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Received in final form 3 July 2007
Accepted 7 August 2007
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