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Centre of Marine Sciences, University of Algarve, Campus de Gambelas, 8005-139 Faro, Portugal
1 Laboratorio de Ictiofisiologia y Acuicultura, Instituto de Investigaciones Biotecnologicas-Instituto Tecnologico de Chascomus (IIB-INTECH), Camino de Circunvalacion Laguna Km 6 (B7130IWA), Chascomus, Provincia de Buenos Aires, Argentina.
(Requests for offprints should be addressed to A V M Canário; Email: acanario{at}ualg.pt)
| Abstract |
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| Introduction |
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GnRHs exert their actions through GnRH receptors (GnRHRs) which are members of the rhodopsin-like G-protein coupled receptor (GPCR) family. These receptors show three main functional domains: 1) a N-terminal extracellular domain; 2) seven
-helical transmembrane (TMs) domains connected by hydrophilic intra- and extracellular loops and 3) a C-terminal cytoplasmic domain. The extracellular domains and superficial regions of the TMs are usually involved in binding. The TMs are believed to be involved in receptor configuration. The C-terminal mediates effectors binding, propagation of signalling events, desensitization and internalization (McArdle et al., 2002, Millar et al., 2004). During the last decade several cDNAs for GnRHR have been cloned, often more than one in the same species, e.g. three in bullfrog, Rana catesbiana (Wang et al. 2001) and medaka, Oryzias latipes (Okubo et al. 2001, 2003) and two in primates (Millar et al. 2001, Neill et al. 2001), goldfish, Carassius auratus (Illing et al. 1999) and African catfish, Claria gariepinus (Bogerd et al. 2002). As a result GnRH receptors have recently been grouped in three main subtypes designated GnRHR1, GnRHR2 and GnRHR3, the latter only found in teleost fishes and amphibians (Millar et al. 2004). In addition, duplicated genes within these subtypes have been also described in teleosts, e.g. Oncorhynchus masou (Jodo et al. 2003). The presence of multiple GnRH ligands for several receptors suggests complex regulatory mechanisms and raises the question of whether new functions, more specialization, or both, have been acquired by the duplicated genes.
Data mining of model fish genome sequences has facilitated the identification of novel genes and in this paper we have used the GnRHRs DNA sequences identified in the Fugu rubripes genome database to isolate the corresponding cDNAs in the European sea bass, Dicentrarchus labrax. Like most perciform species, the European sea bass synthesizes three GnRH ligands: sGnRH, sbGnRH and cGnRHII (González-Martínez et al. 2001, 2002, Zmora et al., 2002). However, until now only a single GnRHR cDNA from European sea bass has been cloned and its expression profile in the brain and pituitary suggests it may mediate gonadotrophin release (González-Martínez et al. 2004). In the current study we report the cloning of four additional European sea bass cDNAs encoding GnRHRs (dlGnRHR), examine their tissue distribution and reassess their classification based on the phylogenetic analysis of available sequences.
| Materials and methods |
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Sexually mature males and females from European sea bass were obtained from TIMAR Cultura de Águas (Livramento, Portugal) and maintained at the Ramalhete Experimental Station (University of Algarve, Faro, Portugal) prior to sampling, in through-flow seawater tanks at 17 ±2 °C under natural photoperiod. Animal care was in accordance with the ethical guidelines of the Animal Behaviour Society (ASAB 2003) and national legislation. Fish were killed with an overdose of 2-phenoxyethanol (1:10000, SigmaAldrich, Madrid, Spain), tissues were dissected and immediately frozen in liquid nitrogen and stored at 80 °C until used.
In silico analysis and cloning of dlGnRHRs
The puffer fish (Fugu rubripes) Fugu Consortium Genome Database (http://fugu.hgmp.mrc.ac.uk) was interrogated with the amino acid sequences of available fish GnRH receptors via the tBLASTn programme using the Blosum62 matrix and an expected value of 10 (Altschul et al. 1997). Scaffolds identified to contain GnRHR sequences were run on the HGMP Nix interface (G Williams, P Woollard & P Hingamp, unpublished data; http://www.hgmp.mrc.ac.uk/NIX/) providing, as output, putative gene organization, coding sequence, amino acid translation and neighbouring genes. Five different loci were found with putative open reading frames (ORFs) for GnRHR located in scaffolds FS2243, FS553, FS686, FS3910 and FS1435. The putative coding sequences of Fugu genes together with other available fish sequences were used to design five primer pairs to amplify the corresponding cDNAs in European sea bass (Table 1
) and the amino acid translations were used in the phylogenetic analysis.
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Construction and screening of cDNA libraries
cDNA libraries from European sea bass brain (pituitary included) and testis were constructed using UNI-ZAP XR Vector (Strategene, Amsterdam, The Netherlands) with reverse-transcribed cDNA obtained from 45 µg of poly(A)+ RNA and using UNI-ZAP XR cDNA synthesis kit (Stratagene) according to the suppliers instructions. Library screening was carried out under high stringency conditions using the five specific dlGnRHR probes obtained by PCR amplification. Duplicate membranes (Hybond NX- Amersham Biosciences, Buckinghamshire, UK) were hybridized with each of the [
32P]dCTP-labelled dlGnRHR probes (Rediprime Random Labelling kit, Amersham Biosciences) overnight at 56 °C in a solution containing EDTA 1 mM, SDS 7% and sodium phosphate 0.25 M (ChurchGilbert hybridization solution; Church & Gilbert 1984). Stringency washes were carried out at 56°C for 5 minutes with 2 x SSC, 1 x SSC (150 mM NaCl, 15 mM sodium citrate, pH 7.0) and 0.1 x SSC containing 0.1% SDS.
Tissue distribution of GnRHRs by RT-PCR and Southern blotting
The distribution pattern of dlGnRHRs expression was investigated by RT-PCR on anterior brain (olfactory bulb and telencephalon), middle brain (optic tectum and diencephalons), posterior brain (cerebellum, medulla oblongata and part of the spinal cord), pituitary gland, eye, olfactory epithelium, gonads, kidney, head kidney, spleen, liver, heart, midgut, gills and muscle. cDNA (40 µl) was prepared from 5 µg total RNA extracted with TRI Reagent and reverse transcribed with MMLV-RT and random hexamers. PCR was performed on 1 µl of cDNA with specific primers (Table 1
) designed to span two exonintron boundaries. Only single RTP-PCR products of the size of the expected cDNA were obtained, indicating the absence of genomic DNA contamination. Thermocycling conditions were optimized for each primer to be on the linear region of amplification and were 4 min at 94 °C, 2730 cycles of 45 sec at 94 °C, 45 sec at 5659 °C and 45 sec extension at 72 °C, with a final 5 min extension at 72 °C. A 540 bp fragment of European sea bass 18S was amplified using oligonucleotides 18S-fw 5' TCA AGA ACG AAA GTC GGA GG 3' and 18S-rev 5'GGA CAT CTA AGG GCA TCA CA 3' (3 min at 94 °C, 16 cycles of 45 sec at 94 °C, 45 sec at 48 °C and 45 sec at 72 °C, followed by 5 min extension at 72 °C) and used as an internal control for the amount of cDNA per reaction. Each PCR product was transferred onto a nylon membrane (Hybond N; Amersham Biosciences) and hybridized overnight at 64 °C with ChurchGilbert hybridization solution with the corresponding probe labelled with [
32P]dCTP by random priming (RediPrime Random Labelling kit, Amersham Biosciences). Stringency washes were carried out at 64 °C with 2xSSC, 1xSSC and 0.1xSSC containing 0.1% SDS.
Sequence comparison and phylogenetic analysis
The following sequences with accession numbers and abbreviations were used: buffalo, Bubalus bubalis (Bb, CAF21711 [GenBank] , cow, Bos taurus, (Bt, NP803480), sheep, Ovis aries (Oa, CAA50978 [GenBank] , human, Homo sapiens (R1, AAA35917 [GenBank] R2, Q96P88), Rhesus macaque, Macaca mulata (Mm2, AAK52745 [GenBank] , Bonnet macaque, Macaca radiata (Mr, AAG43378 [GenBank] , green monkey, Aethiops sabeus (As, AAK52746 [GenBank] , marmoset, Callitrix jacchus (CjII, AAK60927 [GenBank] , horse, Equus caballus (Ec, O18821 [GenBank] ), dog, Canis canis (Cc, Q9 MZI6), Norwegian rat, Rattus norvegicus (Rn, NP112300), mouse, Mus musculus (Mm, Q01776 [GenBank] ), Guinea pig, Cavia porcellus (Cp, Q8CH60), Chicken, Gallus gallus (Gg, NP989984), leopard gecko, Eublepharis macularius (Em, BAD11150 [GenBank] , bullfrog, Rana catesbeiana (RcI AAG42575 [GenBank] RcII AAG42949 [GenBank] RcIII AAG42574 [GenBank] , frog, Rana ridibunda (Rr1 AAP15162 [GenBank] Rr2 AAP15163 [GenBank] Rr3 AAP15164 [GenBank] , brown frog, Rana dybowskii (Rd1 AAO50198 [GenBank] Rd2 AAO50196 [GenBank] Rd3 AAO50197 [GenBank] , African clawed frog, Xenopus laevis, (Xl1 AAF89754 [GenBank] Xl2 AAK49334 [GenBank] , rubber eel, Typhlonectes natans (Tn, AAD49750 [GenBank] , stripped bass, Morone saxatilis (Ms, AAF28464 [GenBank] , amberjack, Seriola dumerilii (Sd, CAB65407 [GenBank] , sea bream, Sparus auratus (Sa, AAS97968 [GenBank] , Nile tilapia, Oreochromis niloticus (On1 BAC77241 [GenBank] On2 BAC77240 [GenBank] On3 BAD27389 [GenBank] , medaka, Oryzias latipes (Ol1 BAB70506 [GenBank] Ol2 BAB70505 [GenBank] Ol3 BAC97833 [GenBank] , African catfish, Clarias gariepinus (Cg1, BAC97836 [GenBank] Cg2, AAM95605 [GenBank] , goldfish, Carassius auratus (CaA, AAD20001 [GenBank] CaB AAD20002 [GenBank] , masou salmon, Oncorhynchus masou (Oma1, BAC98943 [GenBank] Oma4, BAC98946 [GenBank] , rainbow trout, Oncorhynchus mykiss (Om, CAB93351 [GenBank] , Japanese eel, Anguilla japonica (Aj, BAB11961 [GenBank] .
Multisequence alignments of the full-length proteins were carried out using CLUSTAL X (Thompson et al. 1997). Protein sequence similarities between different forms of GnRHR and between species were calculated with GeneDoc (Nicholas et al. 1997) and protein motifs were identified using the Prosite database (Falquet et al. 2002). The putative transmembrane domains (TMs) were determined with TMHMM 2.0 (Krogh et al. 2001). Phylogenetic data analysis was restricted to TMs which were extracted from all identified genes (TMs 1, 2, 3, 4, 5, 6 and 7) and aligned with Clustal X. Parsimonious consensus trees of the TMs of all available GnRHR were generated using PAUP software (version 4.0, Swofford 2002) with the output of Clustal X alignments. Bootstrap values were calculated with 1000 replicates to estimate the robustness of internal branches.
| Results |
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Five different loci with putative open reading frames (ORFs) for GnRHR were identified in scaffolds FS2243, FS553, FS686, FS3910 and FS1435 of the sequenced genome of the tetraodontiform Fugu rubripes. Analysis of the putative GnRHR gene structure of FS2243 and FS553 showed that their coding regions encompassed four exons and three introns while for FS686, FS3910 and FS1435 there were three exons and two introns (Table 2
).
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A multisequence alignment of the amino acid sequences of dlGnRHRs with that of other vertebrates revealed the presence of conserved features of the class A, rhodopsin-like family of G-protein coupled receptor superfamily, namely the seven transmembrane domains and the N-and C-terminal regions (Fig. 1
). Amino acid sequence identity among the dlGnRHRs, including the trans-membrane domains but excluding the highly variable N-and C-terminal tails, ranged between 49% and 82% (dlGnRHR-1B not included, see Table 3
). Across the vertebrates, sequence similarities between the European sea bass receptors ranged between 38% with human GnRHR2 and 97% with Fugu.
A phylogenetic analysis of the GnRHR transmembrane domains shows that there are two main receptor lineages encompassing all vertebrates (designated type I and type II, Fig. 2
). Within taxa, gene duplications appear to have occurred in the amphibians and in teleost fishes. Considering that each of the clades which include a European sea bass and a Fugu GnRHR is encoded by a separate gene, the lineage which includes the human GnRHR type 1 appears to contain at least one teleost specific gene duplication encompassing the Cyprinidiformes, Salmoniformes and the modern teleost fishes (Perciformes, Atherinidiformes and Tetraodontiformes; Fig. 2
). This results in two teleost subtypes. However, the Japanese eel receptor did not fall unambiguously in either of the two teleost subtypes. In the lineage which includes human GnRHR2, three teleost clades can be identified and their tree topology suggest two gene duplications, with one possibly specific to the modern teleosts. Two clades within this lineage are also present in the amphibians suggesting a duplication event also occurred in this class.
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A comparative analysis of conservation of amino acids that have been implicated in receptor function with reference to the human type I receptor (Millar et al. 2004) show that not all are fully conserved. For those amino acids important for the structure of the receptor or of the binding pocket Cys114, Trp164, Cys196, Trp206, Trp280, Trp291 and Pro320 are fully conserved throughout the vertebrates. None of the amino acids implicated in G-protein coupling in mammalian receptors are conserved in the fish receptors. Amino acids Asp98, Trp101, Asn102, Lys121 and Asn212 implicated in ligand binding are fully conserved but not Tyr290 (modified only in Nile tilapia) and Asp302 (conserved only in some mammals). Of the amino acids implicated in receptor activation only Asn87 is not conserved.
Tissue mRNA expression of dlGnRHRs
All dlGnRHRs have a common pattern of medium to high abundance in the anterior and middle brain in the two females and two males that were analysed (Fig. 3
). Of the two GnRHR types (1 and 2), type 1 has the widest distribution among non reproductive tissues, while type 2 is more restricted to the central nervous system. dlGnRHR-1A transcripts are also relatively abundant in the pituitary, olfactory epithelium, ovary and eye. Lower levels of expression are detected in the posterior brain region, gills and kidney. Besides its expression in brain, olfactory epithelium and kidney, dlGnRHR-1B can be detected in the pituitary, eyes, gills, gut and liver. dlGnRHR-2A has higher expression in the anterior and midbrain, pituitary and in both ovary and testis (not shown). Faint expression is found in the olfactory epithelium, eyes and gills. dlGnRHR-2B is mainly expressed along the central nervous system and gonads. Surprisingly, this receptor has no expression in the pituitary gland. dlGnRHR-2C is also expressed in the three brain regions, and in the pituitary, eyes and testis (not shown). Faint expression is found in the ovary and head kidney.
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| Discussion |
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We did not find phylogenetic, structural or functional justification to name, as recently proposed (Okubo et al. 2001, Millar et al. 2004), a third receptor type which would split mammalian type II and the closest amphibian clade from the other amphibian and, following our designation, fish type II receptors. If a third receptor type were designated the resulting proposed clades would split through a phylogenetic division separating higher from lower vertebrates. Analysis of gene organization corresponding to the coding region of the cDNAs (Table 2
) shows that in both GnRHR1 and GnRHR2 types, genes with three exons and two introns and genes with four exons and three introns (four and five, respectively in gecko) are present, the latter in some but not all fishes (Madigou et al. 2000, Okubo et al. 2000, 2001, 2003) and Xenopus (Troskie et al. 2000). In the genes with more than three exons, the 1st exon appears to have acquired an intron (Okubo et al. 2003). Overall, this indicates that gene organization per se is not diagnostic to classify GnRH receptor types. The suggestion of three receptor types has been partly fuelled by the fact that ligand evolution appears to have led to three main clades, one of which consisting only of teleost fish (Millar et al. 2004). However, despite extensive studies of different GPCR families and their receptors there is so far no clear evidence supporting the notion that ligand evolution coincides with receptor evolution. Furthermore, similar observations of fish specific duplications have occurred for other genes in fish, including nuclear receptors, developmental genes, enzymes, etc. (Amores et al. 1998, Tchoudakova & Callard 1998, Robinson-Rechavi et al. 2001). It appears that in fishes a specific round of genome duplication with gene loss has occurred (Jaillon et al. 2004) and it is possible that segmentary genomic duplications may have resulted in the larger number of GnRHRs, at least in some fish species. Recent segmentary genome duplications have also been proposed to have occurred in human (56% euchromatin; She et al. 2004) and mouse genomes (2%; Bailey et al. 2004). The most parsimonious conclusion is therefore that in vertebrates the GnRH receptor family is composed of two receptor types and that specific duplications have occurred early in the evolution of amphibians and ray-finned fishes (possibly more than once). In the following discussion GnRHR nomenclature in fish will be adapted to the European sea bass notation which is based on the topology of the phylogenetic tree (Fig. 2
).
Amino acid sequence comparisons of the TMs of the GnRHRs extracted from the Fugu rubripes genome and from the sea bass cDNAs had highest similarities of between 77% and over 80% between receptors belonging to the same major clade (type I or type II) while across clades sequence similarity was low, between 51 and 55%.
The analyses of amino acids that have been implicated in receptor function show that the highest conservation is present in those associated with ligand binding. An exception is Asp302 (numbering in reference to human GnRHR1) which is often replaced by Glu another negatively charged amino acid in GnRHR1 receptors. The acidic residue in the mammalian receptor is proposed to induce a high affinity conformation of mammalian GnRH that allows it to interact with a final binding pocket (Fromme et al. 2001). However, an acidic amino acid at position 302 does not appear to be required for high affinity binding to GnRH II (Millar et al. 2004). This is consistent with the lack of conservation of Asp302 in GnRHR2 receptors and being replaced by small or hydrophobic amino acids: Pro in mammals and some amphibians, Gln in some amphibians or His in all fishes. Although GnRHR2 in different species generally bind GnRH II, but not mammalian GnRH, with high affinity (Millar et al. 2004), the results of ligand binding studies do not show a clear pattern of association between putative GnRH ligands and GnRHRs types and subtypes (e.g. Illing et al. 1999, Millar et al. 2001, Neill et al. 2001, Okubo et al. 2001, Wang et al. 2001, Bogerd et al. 2002).
For those amino acids important for the structure of the receptor or of the binding pocket, Cys114, Trp164, Cys196, Trp206, Trp280, Trp291 and Pro320, are fully conserved throughout the vertebrates. Of interest is the fact that of the two pairs of cysteines which would enable disulfide bond formation in the extracellular domain (Millar et al. 2004), only Cys114Cys196 is conserved in all receptors, while Cys14Cys200 are only present simultaneously in mammalian GnRH type I receptors. These differences will modify the receptors tertiary structure and add further complexity in trying to deduce the contribution of structural elements for ligand binding.
Analysis of mRNA expression of the dlGnRHRs makes it evident that the action of GnRHs is not limited to the central nervous system and the pituitary gland. dlGnRHRs are also expressed in the peripheral tissues related to the senses, reproduction and homeostasis: the eyes, olfactory epithelium, gonads, kidney, gut, liver, and gills. The role of GnRHs in peripheral tissues remains to be established.
All the dlGnRHRs are expressed in the brain, especially in the anterior and mid brain which include the olfactory bulb, telencephalon to diencephalon and the optic tectum. An analysis of co-localization in the brain of the three European sea bass GnRH forms (González-Martínez et al. 2002) and the five receptors, may provide an insight on ligand specificity and function. Binding sites have also been described in different pituitary cells in pejerrey, Odontesthes bonariensis (Stefano et al. 1999). Of the European sea bass receptors, dlGnRHR-2A appears to be expressed only in LH-gonadotrophs and the level correlates with the reproductive cycle (González-Martínez et al. 2004). However, in teleost fishes, hypothalamic GnRH neurones innervate the adenohypophysis to control the release not only of gonadotrophins (Somoza et al. 2002) but also of growth hormone (Marchant et al. 1989, Li et al. 2002), prolactin (Weber et al. 1997), somatolactin (Kakizawa et al. 1997) and thyroid stimulating hormone (Roy et al. 2000). In the goldfish GnRHR-1A and -1B have an overlapping expression and are present mainly in gonadotropes and to a lesser extent in some somatotrophs (Illing et al. 1999). With heterologous antisera in Nile tilapia immunoreactive GnRHR-1A localized to FSH and LH cells and GnRH-1B to prolactin FSH- and LH-containing cells and as small clusters scattered along the periphery of the pars intermedia of the pituitary (Parhar et al. 2002). Also heterologous antisera to GnRHR-2A and -2C stained GH-containing cells of the Nile tilapia pituitary (Parhar et al. 2002). The fact that dlGnRHR-2B is not expressed in the pituitary supports the hypothesis of GnRH peptides possibly having specialized functions not related to gonadotrophin release.
Nevertheless, all European sea bass receptors, apart from dlGnRHR-1B, were strongly expressed in the gonads (i.e. testis and/or ovary). High levels of GnRHRs expression have also been detected in the gonads of other teleosts (African catfish, Bogerd et al. 2002; goldfish, Illing et al. 1999; rainbow trout, Madigou et al. 2000) and in mammals (Dong et al. 1996, Kakar & Jennes, 1995). This has also been confirmed by binding studies (Pati & Habibi 1993), suggesting a direct effect of GnRH on sex steroid synthesis and gametogenesis.
dlGnRHR-2C and dlGnRHR-1A had relatively higher expression in the eye, an observation that has also been made in rainbow trout (GnRHR-1B) and Japanese eel, Anguilla japonica (GnRHR1) (Madigou et al. 2000, Okubo et al. 2000). Furthermore, GnRH immunoreactive fibers have been detected in the retina of platyfish, Xyphophorus maculatus (Munz et al. 1981), goldfish (Kah et al. 1986) and pejerrey (Miranda et al. 2003) and in the olfactory systems of several teleost species, including the American eel, Anguilla rostrata (Grober et al. 1987) and masu salmon (Kudo et al. 1994). Fish olfactory receptors are also highly sensitive to GnRH (Andersen & Doving 1991). Immunoreactive GnRH somata have been identified along the rostrocaudal extent of the olfactory nerve, and clustered within the medial component of the olfactory nerve as it arises from the olfactory epithelium (Nevitt et al. 1995). Since at least some cells in this cluster project to the retina, possibly being part of a terminal nerve ganglion, it has been suggested that perhaps GnRH facilitates visual and olfactory perception during sexual interactions (Nevitt et al. 1995). A role for olfactory stimuli in the regulation of GnRH secretion has been suggested in sea lamprey, Petromyzon marinus, based on the overlap of olfactory- and GnRH-containing fibres from prolarval stages to metamorphosis (Tobet et al. 1996). It has been recently demonstrated using GnRH-receptor antagonist that GnRH secreted by mammalian olfactory cells promotes the differentiation and migration of the olfactory sensory lineage cells that are committed to become GnRH neurons (Romanelli et al. 2004). The expression of both dlGnRHR-2A and dlGnRHR-2B in the olfactory rosettes suggest that they are likely mediators of these processes.
Of particular interest is the expression of GnRHRs in tissues related to osmoregulation. We show for the first time GnRHR expression in the gills (dlGnRHR-1A, -1B and -2A) and kidney (dlGnRHR-2A and dlGnRHR-2B). Few species have been also shown to express GnRH peptide. Teleost (Haplochromis burtoni) kidney express at least one form of GnRH (White & Fernald 1998) and human kidneys express two GnRH forms (Kakar & Jennes 1995). Since GnRH has never been associated with osmoregulation, a possible explanation for the presence of GnRH and its receptor in kidney is that this tissue contains a high concentration of mast cells which express GnRH in high levels (Khalil et al. 2003, Marchetti et al. 1996, Rissman 1996).
In conclusion, the existence of five different GnRH receptors to three GnRH forms in this model of vertebrate species indicates a complex interplay occurs between ligands and receptors in the regulation of pituitary and hormone secretion. The fact that GnRHRs show a wide and different pattern of tissue distribution, is suggestive that, in addition to regulating the secretion of gonadotrophins from the anterior pituitary, GnRH and its receptor also play a role in the regulation of a range of cellular functions in an autocrine or paracrine manner (Millar 2003). However, when considering the various species from different phylogenetic positions, in which GnRHRs expression has been studied, it is not possible as yet to identify a specific pattern of expression characteristic of each receptor type or subtype. Generally speaking the common feature is the expression of the various receptors in the central nervous system, but the distribution in other tissues is more variable. This suggests that in any one species (or higher taxonomic group) the GnRHRs receptors are generally involved in some ancestral functions, e.g. those related to reproduction, but at a peripheral level specialization of functions have also evolved independently.
| Acknowledgements |
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Received 11 February 2005
Accepted 15 February 2005
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